BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002E01LP1|AL424968
(952 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1233 1831 0.0
>3x_Contig1233
Length = 4604
Score = 1831 bits (919), Expect = 0.0
Identities = 943/953 (98%), Gaps = 2/953 (0%)
Strand = Plus / Plus
Query: 1 cccctctcagatcagtaaagctgccatttcgttctgtttactgattgtgtatttacaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 cccctctcagatcagtaaagctgccatttcgttctgtttactgattgtgtatttacaaat 1883
Query: 61 attaaattccaacgaaatgtcgtctaatgtcaactacttactagaaatgccttaaacgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1884 attaaattccaacgaaatgtcgtctaatgtcaactacttactagaaatgccttaaacgaa 1943
Query: 121 cacaacactacaacaagcaaagactgccaaagtctgtgattcaraggtgcaggctccacg 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1944 cacaacactacaacaagcaaagactgccaaagtctgtgattcaaaggtgcaggctccacg 2003
Query: 181 tctatctgtaataactatgggtaagaraggctactatgccgttgcaaatggcagaaacgt 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2004 tctatctgtaataactatgggtaagaaaggctactatgccgttgcaaatggcagaaacgt 2063
Query: 241 tggtgttttcgattcatggtctgaatgtcaagaatcagtaaacggttactcgaacgcgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2064 tggtgttttcgattcatggtctgaatgtcaagaatcagtaaacggttactcgaacgcgaa 2123
Query: 301 gtttaaacgattcgatacgccagcg-gragctagagcatttgccaacagcagcagtagct 359
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 2124 gtttaaacgattcgatacgccagcgcgaagctagagcatttgccaacagcagcagtagct 2183
Query: 360 caggacactcattcccatctacatcgtccaaatcctacaggtcgtattctggrtccagtt 419
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2184 caggacactcattcccatctacatcgtccaaatcctacaggtcgtattctggatccagtt 2243
Query: 420 cagggtccagttacgggcactacggaggccatcagcratctacttacaaccaagcaccct 479
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2244 cagggtccagttacgggcactacggaggccatcagcaatctacttacaaccaagcaccct 2303
Query: 480 acaacagtcacagctcctatagtaattaccactcaaragcagcagcagcagcggcagcgc 539
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2304 acaacagtcacagctcctatagtaattaccactcaaaagcagcagcagcagcggcagcgc 2363
Query: 540 caccaccaccaccttcatcttcctcattctatgcggtgagaagtagtgacagctcagtac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2364 caccaccaccaccttcatcttcctcattctatgcggtgagaagtagtgacagctcagtac 2423
Query: 600 caaacaaagtgtttaccaactgggccgattgcgaaagctacgtcgaaggcgcgtagaaac 659
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2424 caaacaaagtgtttaccaactgggccgattgcaaaagctacgtcgaaggc-cgtagaaac 2482
Query: 660 ctttcctacaggaaatttgacactccttctaaggcagacgatttcatacaaggacgtgcc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2483 ctttcctacaggaaatttgacactccttctaaggcagacgatttcatacaaggacgtgcc 2542
Query: 720 tctaacgaaacgatatattcgcatctcaatactacggcgtcccaattctcacaagctcac 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2543 tctaacgaaacgatatattcgcatctcaatactacggcgtcccaattctcacaagctcac 2602
Query: 780 aaaatcacacctgaacgccgttcccaagtccgtgtcccagcagcaccatgcaacgtttac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2603 aaaatcacacctgaacgccgttcccaagtccgtgtcccagcagcaccatgcaacgtttac 2662
Query: 840 tgcgatggatcctctttcaacaatggatttgagggtgcaagagccgggtacggtatatat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2663 tgcgatggatcctctttcaacaatggatttgagggtgcaagagccgggtacggtatatat 2722
Query: 900 ttcgagggcgaggatagaagaatcgcaagamcattgacgaatggtaaccaaac 952
|||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2723 ttcgagggcgaggatagaagaatcgcaagaccattgacgaatggtaaccaaac 2775
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5398
Number of Sequences: 1807
Number of extensions: 5398
Number of successful extensions: 193
Number of sequences better than 1.0e-20: 1
length of query: 952
length of database: 10,358,551
effective HSP length: 16
effective length of query: 936
effective length of database: 10,329,639
effective search space: 9668542104
effective search space used: 9668542104
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)